The detailed information of tRNA gene sequence


Sequence ID>SRA1002531
Genome IDSRR001325.109055
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 43
End posion on genome 115
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taggtgcagt
tRNA gene sequence 
GCCCCGGTAGCTCAGAGGCCAGAGCGGCAGCCTCGTAAGTTGTTGGCCGCGGGTTCAAAT
CCCGCCCGGGCTAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002531	Thr	CGT
                   t      Annn nnnnnnnnnn
                     G + T
                     C   C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        A      | | | | |     A
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    C       G A G C
      C A          G     TGGCC
                    G + T
                    C - G
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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