The detailed information of tRNA gene sequence


Sequence ID>SRA1002538
Genome IDSRR001326.2882
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 31
End posion on genome 107
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
gaattgcgtT
tRNA gene sequence
GGGCGGGTAGATCAGCATGGAATGATCGCCACGTTGGCATCGTGGAGGCCGCGGGTTCAA
ATCCCGCCCCGTCCANnn
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002538	Ala	GGC
                   T      ANnn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    A C G A        A      | | | | |     A
  T         C T A G       G C G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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