The detailed information of tRNA gene sequence


Sequence ID>SRA1002541
Genome IDSRR001326.24664
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 91
End posion on genome 14
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ggttgtttct
tRNA gene sequence 
GGGCGGGTAGATCAGCTTGGAATGATCGCGACGTTGGCATCGTCGAGGTCGCGGGTTCAA
ATCCCGTCCCGTCCACCA
Downstream region at tRNA end position 
aatgttatga
Secondary structure (Cloverleaf model)
>SRA1002541	Ala	GGC
                   t      ACCA aatgttatga
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    T C G A        A      + | | | |     A
  T         C T A G       G C G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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