The detailed information of tRNA gene sequence


Sequence ID>SRA1002544
Genome IDSRR001326.39893
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 24
End posion on genome 100
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gaattgcgtT
tRNA gene sequence 
GGGCGGGTAGATCAGCATGGAATGATCGCCACGTTGGCATCGTGGAGGCCGCGGGTTCAA
ATCCCGCCCCGTCCATtg
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002544	Ala	GGC
                   T      ATtg nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    A C G A        A      | | | | |     A
  T         C T A G       G C G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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