The detailed information of tRNA gene sequence


Sequence ID>SRA1002549
Genome IDSRR001326.49956
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 12
End posion on genome 84
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gagaggtggt
tRNA gene sequence 
GCCCGAGTAGCGCAATGGTAGCGCAACCGACTTGTAATCGGTAGGTTAGTGGGTTCGAAT
CCCCTCTCGGGCTggg
Downstream region at tRNA end position 
ttatttaggg
Secondary structure (Cloverleaf model)
>SRA1002549	Thr	TGT
                   t      Tggg ttatttaggg
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     T C C C C     A
        A A        A      +   | | |     G
      T     C G C G       G T G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     AGGTTA
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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