The detailed information of tRNA gene sequence


Sequence ID>SRA1002560
Genome IDSRR001663.13904
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 108
End posion on genome 33
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aaaaaattaa
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGTAGAGCGTCAGCCTTCCAAGCTGAATGTCGCCGGTTCGAAC
CCGGTCTCCCGCTCTA
Downstream region at tRNA end position 
aattaaatta
Secondary structure (Cloverleaf model)
>SRA1002560	Gly	TCC
                   a      TCTA aattaaatta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          C A
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK