The detailed information of tRNA gene sequence


Sequence ID>SRA1002565
Genome IDSRR001663.23440
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 107
End posion on genome 32
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aaaaaattaa
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGTAGAGCGTCAGCCTTCCAAGCTGAATGTCGCCGGTTCGAAC
CCGGTCTCCCGCTCTA
Downstream region at tRNA end position 
aattaaatta
Secondary structure (Cloverleaf model)
>SRA1002565	Gly	TCC
                   a      TCTA aattaaatta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          C A
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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