The detailed information of tRNA gene sequence


Sequence ID>SRA1002568
Genome IDSRR001663.37880
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 99
End posion on genome 28
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
TCCTCGGTAGCTCAGCGGTAGAGCGGTCGACTGTTAATCGATTGGTCGCAGGTTCGAATC
CCGCCCGGGGAGttt
Downstream region at tRNA end position 
caaacgaatg
Secondary structure (Cloverleaf model)
>SRA1002568	Asn	GTT
                   n      Gttt caaacgaatg
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
        G A        A      | |   | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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