The detailed information of tRNA gene sequence


Sequence ID>SRA1002574
Genome IDSRR001663.46182
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 13
End posion on genome 88
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttttttacat
tRNA gene sequence 
TCCTCGGTAGCTCAGTTGGTAGAGCAGTTGACTGTTAATCAATTGGTCGCAGGTTCGAGT
CCTGCCCGAGGAGCCA
Downstream region at tRNA end position 
aaaaaaaatt
Secondary structure (Cloverleaf model)
>SRA1002574	Asn	GTT
                   t      GCCA aaaaaaaatt
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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