The detailed information of tRNA gene sequence


Sequence ID>SRA1002583
Genome IDSRR001663.68927
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 11
End posion on genome 86
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atgagattgT
tRNA gene sequence 
GCTCCCTTAGCTCAGCTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTGTGTTCGAA
TCACACAGGGGGCGTtg
Downstream region at tRNA end position 
catnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002583	Arg	TCT
                   T      GTtg catnnnnnnn
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C A C A C     A
      C G A        A      | | | | |     G
    T       C T C G       G T G T G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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