The detailed information of tRNA gene sequence


Sequence ID>SRA1002584
Genome IDSRR001663.72126
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 113
End posion on genome 39
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
agtcccctcG
tRNA gene sequence 
GGCCGATTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCCCTGGTTCAAG
TCCAGGATGGCCCAttc
Downstream region at tRNA end position 
ggttggtttg
Secondary structure (Cloverleaf model)
>SRA1002584	Ile	GAT
                   G      Attc ggttggtttg
                     G - C
                     G - C
                     C   C
                     C - G
                     G   G
                     A - T
                     T - A          T G
                    T     G G A C C     A
      G G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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