The detailed information of tRNA gene sequence


Sequence ID>SRA1002589
Genome IDSRR001663.82885
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 17
End posion on genome 87
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ctatcagagt
tRNA gene sequence 
GCGGGTATGGTGAAATGGTATCATAAGAGCCTTCCAAGCTTAAGGTGCGGGTTCGATTCC
CGCTACCCGCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002589	Gly	TCC
                   t      Tnnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     C G C C C     A
        A A        G      | | | | |     G
      T     A G T G       G C G G G     C
      G     | | | +                 T T
      G     T C A T
        T A        A     AGGT
                    A   A
                    G + T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK