The detailed information of tRNA gene sequence


Sequence ID>SRA1002597
Genome IDSRR001663.102255
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnncgt
tRNA gene sequence 
CGGAGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGCCGGGAGTTCGAA
TCTCTCCACTCCGACCA
Downstream region at tRNA end position 
tttcccgata
Secondary structure (Cloverleaf model)
>SRA1002597	Pro	TGG
                   t      ACCA tttcccgata
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK