The detailed information of tRNA gene sequence


Sequence ID>SRA1002598
Genome IDSRR001663.104010
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 39
End posion on genome 112
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gcgccactgC
tRNA gene sequence 
TGGGATGTAGCCAAGTGGTAAGGCAACTGTTTTTGGTACAGTGTACCGTAGGTTCGAATC
CTACCATCCCAGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002598	Gln	TTG
                   C      GCnn nnnnnnnnnn
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     A C C G       G T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GTACC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK