The detailed information of tRNA gene sequence


Sequence ID>SRA1002599
Genome IDSRR001663.108111
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 102
End posion on genome 29
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tttcttttga
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCACCACTTTGGGGTAGTGGGGGTCGTGGGTTCAAA
TCCCGCCGCTCCGAtgt
Downstream region at tRNA end position 
acaaaaaaaa
Secondary structure (Cloverleaf model)
>SRA1002599	Pro	GGG
                   a      Atgt acaaaaaaaa
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    T - A
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK