The detailed information of tRNA gene sequence


Sequence ID>SRA1002600
Genome IDSRR001663.109910
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 100
End posion on genome 26
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ttaataattg
tRNA gene sequence 
TTGGGGATAGTTTAATCGGTAGAACAGCGGGTTTTGATCCCGTCAGTCCAGGTTCGAGTC
CCGGTCCCCCAGCCA
Downstream region at tRNA end position 
tttttctaac
Secondary structure (Cloverleaf model)
>SRA1002600	Gln	TTG
                   g      GCCA tttttctaac
                     T - A
                     T   C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     G G C C C     A
      T A A        A      | |   | |     G
    C       T T T G       C C A G G     C
    G       + | | |                 T T
    G       G A A C
      T A          A     CAGT
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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