The detailed information of tRNA gene sequence


Sequence ID>SRA1002605
Genome IDSRR001663.128362
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 39
End posion on genome 112
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gcgccactgC
tRNA gene sequence 
TGGGATGTAGCCAAGTGGTAAGGCAACTGTTTTTGGTACAGTGTACCGTAGGTTCGAATC
CTACCATCCCAGTnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002605	Gln	TTG
                   C      GTnn nnnnnnnnnn
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     A C C G       G T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GTACC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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