The detailed information of tRNA gene sequence


Sequence ID>SRA1002606
Genome IDSRR001663.128617
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 98
End posion on genome 18
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
catatataat
tRNA gene sequence 
GCGCCAGTGGCGGAATGGTAGACGCACTGGTTTTAGGTACCAGCGGGCAACCGTGGGGTT
CAAGTCCCTCCTGGCGCACCA
Downstream region at tRNA end position 
agaatagata
Secondary structure (Cloverleaf model)
>SRA1002606	Leu	TAG
                   t      ACCA agaatagata
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G        + | | |     A
    G       G G C G       T G G G G     C
    G         | | |                 T T
    T       A C G C
      A G          A     CGGGCAACCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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