The detailed information of tRNA gene sequence


Sequence ID>SRA1002608
Genome IDSRR001663.139287
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 15
End posion on genome 90
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatcaagtcT
tRNA gene sequence 
GGGACCGTAGTTCAATCGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAA
TCCCGTCGGTCCCGTtt
Downstream region at tRNA end position 
ttaatttttc
Secondary structure (Cloverleaf model)
>SRA1002608	Asp	GTC
                   T      GTtt ttaatttttc
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T A A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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