The detailed information of tRNA gene sequence


Sequence ID>SRA1002612
Genome IDSRR001663.153922
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 14
End posion on genome 95
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggtgtggttc
tRNA gene sequence 
GGGTCGGTGCCCGAGTGGTTAATGGGGGTGGACTGTAAATCCACTGGCTCTGCCTACGTT
GGTTCAAATCCAACCCGGCCCAtcc
Downstream region at tRNA end position 
accacacgcc
Secondary structure (Cloverleaf model)
>SRA1002612	Tyr	GTA
                   c      Atcc accacacgcc
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    G       G C C C       G T T G G     C
    G       + | | |                 T T
    T       T G G G
      T A A        G     TGGCTCTGCCTAC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK