The detailed information of tRNA gene sequence


Sequence ID>SRA1002617
Genome IDSRR001663.164543
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 17
End posion on genome 92
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tatctttgta
tRNA gene sequence 
GGGCTCGTGGTCTAGGGGTTATGACGTCGCCTTGACATGGCGAAGATCGAGAGTTCAATT
CTCTCCGAGCCCACCA
Downstream region at tRNA end position 
atgatttgcc
Secondary structure (Cloverleaf model)
>SRA1002617	Val	GAC
                   a      ACCA atgatttgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C T C T C     A
      G G A        G      | | | | |     A
    G       T C T G       G A G A G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK