The detailed information of tRNA gene sequence


Sequence ID>SRA1002618
Genome IDSRR001663.165289
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 111
End posion on genome 27
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ncctttaaat
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGTTAATACCAGCAGACTGTAAATCTGCCGCTTCGGCTACGGTA
GGTTCGAATCCTACCCTCTCCACCT
Downstream region at tRNA end position 
atctagtttt
Secondary structure (Cloverleaf model)
>SRA1002618	Tyr	GTA
                   t      ACCT atctagtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    G       G T G G       G T A G G     C
    G       + | | |                 T T
    T       T A C C
      T A A        A     CGCTTCGGCTACG
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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