The detailed information of tRNA gene sequence


Sequence ID>SRA1002620
Genome IDSRR001663.171617
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 108
End posion on genome 25
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ncctttaaat
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGTTAATACCAGCAGACTGTAAATCTGCCGCTTCGGCTACGTAG
GTTCGAATCCTACCCTCTCCACCA
Downstream region at tRNA end position 
tcagtttttt
Secondary structure (Cloverleaf model)
>SRA1002620	Tyr	GTA
                   t      ACCA tcagtttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    G       G T G G       G T A G G     C
    G       + | | |                 T T
    T       T A C C
      T A A        A     CGCTTCGGCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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