The detailed information of tRNA gene sequence


Sequence ID>SRA1002626
Genome IDSRR001663.187475
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 96
End posion on genome 25
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
catgaaaaca
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCAATAGCCTTCCAAGCTAAAGACGAGGGTTCGACTCC
CTTCACCCGCTCtt
Downstream region at tRNA end position 
ttttgctggt
Secondary structure (Cloverleaf model)
>SRA1002626	Gly	TCC
                   a      TCtt ttttgctggt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGAC
                    A   A
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK