The detailed information of tRNA gene sequence


Sequence ID>SRA1002632
Genome IDSRR001663.204148
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 23
End posion on genome 97
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggaaacttc
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCGGCGGTTCGAG
TCCGTCCGGGCCTACtt
Downstream region at tRNA end position 
gaagatgatg
Secondary structure (Cloverleaf model)
>SRA1002632	Met	CAT
                   c      ACtt gaagatgatg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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