The detailed information of tRNA gene sequence


Sequence ID>SRA1002635
Genome IDSRR001663.209685
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 30
End posion on genome 104
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cttatcaact
tRNA gene sequence 
GGGTGTATAGTTCAGTGGTAGAACGTTACGTTGACATCGTAAAGGCCGCTAGTTCGATCC
TAGCTACACCCACCA
Downstream region at tRNA end position 
gataaaattt
Secondary structure (Cloverleaf model)
>SRA1002635	Val	GAC
                   t      ACCA gataaaattt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     A - T          C T
                    T     C G A T C     A
        G A        A      | | | | |     G
      T     C T T G       G C T A G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK