The detailed information of tRNA gene sequence


Sequence ID>SRA1002638
Genome IDSRR001663.212848
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 18
End posion on genome 91
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgagtctcaT
tRNA gene sequence 
TCCTCGGTAGCTCAGCGGTAGAGCGGTCGACTGTTAATCGATTGGTCGCAGGTTCGAATC
CCGCCCGGGGAGTtt
Downstream region at tRNA end position 
tctcaaagcc
Secondary structure (Cloverleaf model)
>SRA1002638	Asn	GTT
                   T      GTtt tctcaaagcc
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
        G A        A      | |   | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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