The detailed information of tRNA gene sequence


Sequence ID>SRA1002640
Genome IDSRR001663.215150
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 101
End posion on genome 30
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ctggagttaa
tRNA gene sequence 
TGGGCCGTCGCCAAGCGGTAAGGCAGCGGGTTTTGGTCTCGCCATTCCTAGGTTCGAATC
CTAGCGGCCCAGttt
Downstream region at tRNA end position 
tccggaatcc
Secondary structure (Cloverleaf model)
>SRA1002640	Gln	TTG
                   a      Gttt tccggaatcc
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G A T C C     A
        G A        C      | | | | |     G
      C     A C C G       C T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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