The detailed information of tRNA gene sequence


Sequence ID>SRA1002642
Genome IDSRR001663.217601
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 102
End posion on genome 31
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ctggagttaa
tRNA gene sequence 
TGGGCCGTCGCCAAGCGGTAAGGCAGCGGGTTTTGGTCTCGCCATTCCTAGGTTCGAATC
CTAGCGGCCCAGttt
Downstream region at tRNA end position 
ttccggaatc
Secondary structure (Cloverleaf model)
>SRA1002642	Gln	TTG
                   a      Gttt ttccggaatc
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G A T C C     A
        G A        C      | | | | |     G
      C     A C C G       C T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    C - G
                    G - C
                    G + T
                    G - C
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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