The detailed information of tRNA gene sequence


Sequence ID>SRA1002645
Genome IDSRR001663.233700
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 86
End posion on genome 12
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tccaccacac
tRNA gene sequence 
GCCCTTGTAGCTCAGCGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCTCGAGTTCAAGTC
TCGACAAGGGCTTCA
Downstream region at tRNA end position 
ctcttactca
Secondary structure (Cloverleaf model)
>SRA1002645	Thr	GGT
                   c      TTCA ctcttactca
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C          T G
                    T     A G C T C     A
        G A        A      | | | | |     A
      C     C T C G       T C G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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