The detailed information of tRNA gene sequence


Sequence ID>SRA1002654
Genome IDSRR001663.282678
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 26
End posion on genome 107
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggtgtggttc
tRNA gene sequence 
GGGTCGGTGCCCGAGTGGTTAATGGGGGTGGACTGTAAATCCACTGGCTCTGCCTACGTT
GGTTCAAATCCAACCCGGCCCAtcc
Downstream region at tRNA end position 
accacacgnn
Secondary structure (Cloverleaf model)
>SRA1002654	Tyr	GTA
                   c      Atcc accacacgnn
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    G       G C C C       G T T G G     C
    G       + | | |                 T T
    T       T G G G
      T A A        G     TGGCTCTGCCTAC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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