The detailed information of tRNA gene sequence


Sequence ID>SRA1002656
Genome IDSRR001663.292139
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 79
End posion on genome 4
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tacgcgattt
tRNA gene sequence 
GGCCATATAGCTCAGTTGGTAGAGCAAGGGACTGAAAATCCCTGTGTCCCTAGTTCAATT
CTAGGTGTGGCCACCA
Downstream region at tRNA end position 
tttnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002656	Phe	GAA
                   t      ACCA tttnnnnnnn
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T + G
                     A - T          T T
                    T     G G A T C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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