The detailed information of tRNA gene sequence


Sequence ID>SRA1002662
Genome IDSRR001663.315219
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 81
End posion on genome 11
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
acgtactagt
tRNA gene sequence 
GCGGGCGTAGTTTAGTGGTAAAACCTCAGCCTTCCAAGCTGATGATGCGGGTTCGATTCC
CGCCGCCCGCTtga
Downstream region at tRNA end position 
ttcacaannn
Secondary structure (Cloverleaf model)
>SRA1002662	Gly	TCC
                   t      Ttga ttcacaannn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C G C C C     A
        G A        A      | | | | |     G
      T     T T T G       G C G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        C     TGAT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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