The detailed information of tRNA gene sequence


Sequence ID>SRA1002669
Genome IDSRR001663.328666
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 30
End posion on genome 101
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
tcacctattt
tRNA gene sequence 
GCGGGTGTAATTCAGTGGTAGAATGTCAGCTTCCCAAGCTGGACGTCGCCGGTTCGAATC
CGGTCACCCGCTtta
Downstream region at tRNA end position 
aaaatagnnn
Secondary structure (Cloverleaf model)
>SRA1002669	Gly	CCC
                   t      Ttta aaaatagnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G G C C     A
        G A        A      + | | | |     G
      T     C T T A       G C C G G     C
      G     | | | |                 T T
      G     G A A T
        T A        G     ACGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK