The detailed information of tRNA gene sequence


Sequence ID>SRA1002683
Genome IDSRR001663.367705
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 12
End posion on genome 86
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cagggctagc
tRNA gene sequence 
GCGGGTGTAGCTCAGTGGTAGAGCACAACCTTGCCAAGGTTGGGGTCGAGGGTTCGAATC
CCTTCACCCGCTCCA
Downstream region at tRNA end position 
aatctcaaca
Secondary structure (Cloverleaf model)
>SRA1002683	Gly	GCC
                   c      TCCA aatctcaaca
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
        G A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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