The detailed information of tRNA gene sequence


Sequence ID>SRA1002684
Genome IDSRR001663.369055
Search identical group
Phylum/ClassSynechococcus metagenome reveals major roles for horizontal gene transfer and plasmids in population diversity (SRP000219)
Species
Start position on genome 16
End posion on genome 92
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctttctgt
tRNA gene sequence 
AGCAGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCAGGTTCAAA
TCCTGCCCCTGCTACCA
Downstream region at tRNA end position 
aattcaaact
Secondary structure (Cloverleaf model)
>SRA1002684	Met	CAT
                   t      ACCA aattcaaact
                     A - T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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