The detailed information of tRNA gene sequence


Sequence ID>SRA1002691
Genome IDSRR001667.15888
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 89
End posion on genome 13
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatatagttt
tRNA gene sequence 
GGTGCGTTAGTTCAGTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCACGAGTTCGAG
TCTCGTACGCACCGCTA
Downstream region at tRNA end position 
atttcatttg
Secondary structure (Cloverleaf model)
>SRA1002691	Asp	GTC
                   t      GCTA atttcatttg
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T G C T C     A
      T G A        A      | | | | |     G
    T       C T T G       A C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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