The detailed information of tRNA gene sequence


Sequence ID>SRA1002706
Genome IDSRR001668.8623
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 20
End posion on genome 94
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
tttgactgac
tRNA gene sequence
AGTCCTATAGCTCAGTTGGTTAGAGCGCTACACTGATAATGTAGAGGTCGGCAGTTCAAC
TCTGCCTGGGACTACtt
Downstream region at tRNA end position
ctnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002706	Ile	GAT
                   c      ACtt ctnnnnnnnn
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T C
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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