The detailed information of tRNA gene sequence


Sequence ID>SRA1002729
Genome IDSRR001669.10205
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 110
End posion on genome 23
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctaaaacaat
tRNA gene sequence 
GGAGAGATGGTAGAGTGGTCGATTACAACGGTCTTGAAAACCGTCGTACCGAGAGGTACC
GGGGGTTCGAANCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
gagccttctg
Secondary structure (Cloverleaf model)
>SRA1002729	Ser	TGA
                   t      GCAA gagccttctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          N A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A T G       G G G G G     C
    G       + | | |                 T T
    T       T T A C
      C G A        A     CGTACCGAGAGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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