The detailed information of tRNA gene sequence


Sequence ID>SRA1002744
Genome IDSRR001669.38693
Search identical group
Phylum/ClassMetagenomic diagnosis of bacterial infections (SRP000222)
Species
Start position on genome 99
End posion on genome 25
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGTGCGTTAGTTCAGTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCACGAGTTCGAG
TCTCGTACGCACCGCag
Downstream region at tRNA end position 
aaaccttcga
Secondary structure (Cloverleaf model)
>SRA1002744	Asp	GTC
                   t      GCag aaaccttcga
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T G C T C     A
      T G A        A      | | | | |     G
    T       C T T G       A C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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