The detailed information of tRNA gene sequence


Sequence ID>SRA1002791
Genome IDSRR002326.18270
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 154
End posion on genome 246
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaaactatt
tRNA gene sequence 
GGAAACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGGGGTGTAGAGCC
TCATCGAGAGTTCGAATCTCTCCGTTTCCGCCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002791	Ser	GCT
                   t      GCCA aannnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G A G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGGGGTGTAGAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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