The detailed information of tRNA gene sequence


Sequence ID>SRA1002835
Genome IDSRR002326.47755
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 184
End posion on genome 110
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtcgaaactc
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCGTGGTTCGAG
TCCACGCAGGCCCACtg
Downstream region at tRNA end position 
taaccagcgg
Secondary structure (Cloverleaf model)
>SRA1002835	Ile	GAT
                   c      ACtg taaccagcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
      G G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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