The detailed information of tRNA gene sequence


Sequence ID>SRA1002907
Genome IDSRR002326.94064
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 106
End posion on genome 182
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
caagacttgt
tRNA gene sequence 
CGGAGTGTGGCGCAGTCTGGTAGCGCACCTGGTTTGGGACCAGGGGGTCCAAGGTTCGAA
TCCTTGTACTCCGACCA
Downstream region at tRNA end position 
aaaaaactaa
Secondary structure (Cloverleaf model)
>SRA1002907	Pro	TGG
                   t      ACCA aaaaaactaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G + T          T A
                    T     G T T C C     A
      T G A        G      | | | | |     G
    C       C G C G       C A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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