The detailed information of tRNA gene sequence


Sequence ID>SRA1002917
Genome IDSRR002326.100477
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 72
End posion on genome 148
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcttctgcaa
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
gcgtttttcc
Secondary structure (Cloverleaf model)
>SRA1002917	Asp	GTC
                   a      GCCA gcgtttttcc
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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