The detailed information of tRNA gene sequence


Sequence ID>SRA1002942
Genome IDSRR002326.113689
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 285
End posion on genome 200
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgccctctct
tRNA gene sequence 
GGAGAAATGGCAGAGTGGTCGATTGCGGCAGTCTTGAAAACTGTTGAACCGTGAGGTTCC
TGGGGTTCGAATCCCTATTTCTCCGCac
Downstream region at tRNA end position 
attgcggtaa
Secondary structure (Cloverleaf model)
>SRA1002942	Ser	TGA
                   t      GCac attgcggtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAACCGTGAGGTTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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