The detailed information of tRNA gene sequence


Sequence ID>SRA1002992
Genome IDSRR002326.142928
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 143
End posion on genome 219
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
gcgccaacgt
tRNA gene sequence
CGGGGAGTGGCGCAGCCTGGTAGCGCGTCTGCTTTGGGAGCAGAGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position
acgatctgcc
Secondary structure (Cloverleaf model)
>SRA1002992	Pro	TGG
                   t      ACCA acgatctgcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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