The detailed information of tRNA gene sequence


Sequence ID>SRA1003011
Genome IDSRR002326.151476
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 279
End posion on genome 189
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaagacagcc
tRNA gene sequence 
GGAGAAGTGGGTGAGTGGCTGAAACCAGTAGTTTGCTAAACTGCCGTAGCTCTAAAGGTT
ACCGGGGGTTCGAATCCCCCCTTCTCCACTA
Downstream region at tRNA end position 
taatgttggg
Secondary structure (Cloverleaf model)
>SRA1003011	Ser	GCT
                   c      ACTA taatgttggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTAGCTCTAAAGGTTACC
                    G - C
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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