The detailed information of tRNA gene sequence


Sequence ID>SRA1003055
Genome IDSRR002326.174083
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 157
End posion on genome 229
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctactttaaa
tRNA gene sequence 
GGGAGTATAGTTCAGTTGGTTAGAATATAGACTTGTCGAGTCTATGACATGGGTTCGAAT
CCCATTACTCTCGaaa
Downstream region at tRNA end position 
acgcccannn
Secondary structure (Cloverleaf model)
>SRA1003055	Asp	GTC
                   a      Gaaa acgcccannn
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     T A C C C     A
      T G A        A      | | | | |     G
    T       C T T G       A T G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     TGAC
                    T - A
                    A - T
                    G - C
                    A - T
                    C - G
                  T       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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