The detailed information of tRNA gene sequence


Sequence ID>SRA1003134
Genome IDSRR002326.232129
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 143
End posion on genome 69
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctccagcacc
tRNA gene sequence 
GGGCCTATAGCTCAATCGGTTAGAGCAGCTGACTCATAATCAGCAGGTCACTGGTTCGAT
TCCAGTTGGGCCCACgg
Downstream region at tRNA end position 
acgcataaaa
Secondary structure (Cloverleaf model)
>SRA1003134	Met	CAT
                   c      ACgg acgcataaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T T
                    T     T G A C C     A
      T A A        A      | | | | |     G
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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