The detailed information of tRNA gene sequence


Sequence ID>SRA1003135
Genome IDSRR002326.233247
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 154
End posion on genome 78
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acggaccctg
tRNA gene sequence 
GGCTTGGTAGCTCAGCTGGTTAGAGCGGTGGATTCATAACCCACAGGTCGGCGGTTCAAG
TCCGCCCCAAGCCACCA
Downstream region at tRNA end position 
gggtccggcg
Secondary structure (Cloverleaf model)
>SRA1003135	Met	CAT
                   g      ACCA gggtccggcg
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C
                     G - C          T G
                    T     C C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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